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bids/mrtrix3_connectome:chrisfilo-patch-1

Manifest digest

sha256:f93055ee1fc5204c69140eef0a71c83d6b672a12c37dd8cf4c34e08d05b21776

OS/ARCH

linux/amd64

Compressed size

3.39 GB

Last pushed

almost 10 years by bids

Type

Image

Manifest digest

sha256:f93055ee1fc5204c69140eef0a71c83d6b672a12c37dd8cf4c34e08d05b21776

Image Layers

Image Layers

1ADD file ... in / 62.66 MB
2/bin/sh -c set -xe &&69.87 KB
3/bin/sh -c rm -rf /var/lib/apt/lists/*364 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'678 B
5/bin/sh -c mkdir -p /run/systemd162 B
6CMD ["/bin/bash"]0 B
7MAINTAINER Robert E. Smith0 B
8/bin/sh -c apt-get update &&54.32 MB
9/bin/sh -c curl -sL https://deb.nodesource.com/setup_4.x335.93 KB
10/bin/sh -c apt-get install -y12.25 MB
11/bin/sh -c add-apt-repository ppa:ubuntu-toolchain-r/test285.19 KB
12/bin/sh -c apt-get update &&42.58 MB
13/bin/sh -c apt-get install -y1.19 MB
14/bin/sh -c wget -qO- ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0/freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0.tar.gz1.84 GB
15/bin/sh -c /bin/bash -c 'touch153 B
16/bin/sh -c wget -O- http://neuro.debian.net/lists/trusty.us-ca.full252 B
17/bin/sh -c apt-key adv --recv-keys142.53 KB
18/bin/sh -c apt-get install -y98.82 MB
19/bin/sh -c apt-get install -y230.86 MB
20/bin/sh -c apt-get install -y2.76 KB
21/bin/sh -c apt-get install -y1 GB
22/bin/sh -c apt-get install -y2.76 KB
23/bin/sh -c wget -qO- http://www.gin.cnrs.fr/AAL_files/aal_for_SPM12.tar.gz327.67 KB
24/bin/sh -c wget -qO- http://www.gin.cnrs.fr/AAL2_files/aal2_for_SPM12.tar.gz358.65 KB
25/bin/sh -c npm install -g10.71 MB
26ENV OS=Linux0 B
27ENV SUBJECTS_DIR=/opt/freesurfer/subjects0 B
28ENV FSF_OUTPUT_FORMAT=nii.gz0 B
29ENV MNI_DIR=/opt/freesurfer/mni0 B
30ENV LOCAL_DIR=/opt/freesurfer/local0 B
31ENV FREESURFER_HOME=/opt/freesurfer0 B
32ENV FSFAST_HOME=/opt/freesurfer/fsfast0 B
33ENV MINC_BIN_DIR=/opt/freesurfer/mni/bin0 B
34ENV MINC_LIB_DIR=/opt/freesurfer/mni/lib0 B
35ENV MNI_DATAPATH=/opt/freesurfer/mni/data0 B
36ENV FMRI_ANALYSIS_DIR=/opt/freesurfer/fsfast0 B
37ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
38ENV MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
39ENV CXX=/usr/bin/g++-50 B
40/bin/sh -c git clone https://github.com/MRtrix3/mrtrix3.git46.63 MB
41/bin/sh -c echo $'FailOnWarn: 1\n'152 B
42ENV FSLDIR=/usr/share/fsl/5.00 B
43ENV FSLMULTIFILEQUIT=TRUE0 B
44ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
45ENV LD_LIBRARY_PATH=/usr/lib/fsl/5.00 B
46ENV PATH=/opt/freesurfer/bin:/opt/freesurfer/mni/bin:/usr/lib/fsl/5.0:/usr/lib/ants:/mrtrix3/release/bin:/mrtrix3/scripts:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
47ENV PYTHONPATH=/mrtrix3/scripts0 B
48COPY file:5646e73eb0088dda0d591b0cea263d74e754e66b05fa50d6a9a198903705054a in /run.py 7.47 KB
49/bin/sh -c chmod 775 /run.py7.48 KB
50COPY file:b8ee7c07d9b37ea5852a07d0f9ba6591e3392b4e26d00b57abb8b2b4565b2c95 in /version 104 B
51ENTRYPOINT ["/run.py"]0 B

Command

ADD file:bc2e0eb31424a88aadc42486b6762c321e3457527daa43bcad45819d38c3a2ed in /