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rwblair/fmriprep:pybids_regex_fix

Manifest digest

sha256:36dab9e557fcd78f45cf53d491b0edf4cb6303cdc234ab1b4b83e5a60972978d

OS/ARCH

linux/amd64

Compressed size

3.78 GB

Last pushed

almost 10 years by rwblair

Type

Image

Manifest digest

sha256:36dab9e557fcd78f45cf53d491b0edf4cb6303cdc234ab1b4b83e5a60972978d

Image Layers

Image Layers

1ADD file ... in / 47.89 MB
2/bin/sh -c set -xe &&822 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*514 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'681 B
5/bin/sh -c mkdir -p /run/systemd163 B
6CMD ["/bin/bash"]0 B
7/bin/sh -c apt-get update &&173.37 MB
8ENV FSLDIR=/usr/share/fsl/5.00 B
9ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
10ENV PATH=/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
11ENV FSLMULTIFILEQUIT=TRUE0 B
12ENV POSSUMDIR=/usr/share/fsl/5.00 B
13ENV LD_LIBRARY_PATH=/usr/lib/fsl/5.0:0 B
14ENV FSLTCLSH=/usr/bin/tclsh0 B
15ENV FSLWISH=/usr/bin/wish0 B
16ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
17ENV AFNI_MODELPATH=/usr/lib/afni/models0 B
18ENV AFNI_IMSAVE_WARNINGS=NO0 B
19ENV AFNI_TTATLAS_DATASET=/usr/share/afni/atlases0 B
20ENV AFNI_PLUGINPATH=/usr/lib/afni/plugins0 B
21ENV PATH=/usr/lib/afni/bin:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
22/bin/sh -c curl -sSL ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-release-candidate/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz2.41 GB
23ENV FSL_DIR=/usr/share/fsl/5.00 B
24ENV OS=Linux0 B
25ENV FS_OVERRIDE=00 B
26ENV FIX_VERTEX_AREA=0 B
27ENV SUBJECTS_DIR=/opt/freesurfer/subjects0 B
28ENV FSF_OUTPUT_FORMAT=nii.gz0 B
29ENV MNI_DIR=/opt/freesurfer/mni0 B
30ENV LOCAL_DIR=/opt/freesurfer/local0 B
31ENV FREESURFER_HOME=/opt/freesurfer0 B
32ENV FSFAST_HOME=/opt/freesurfer/fsfast0 B
33ENV MINC_BIN_DIR=/opt/freesurfer/mni/bin0 B
34ENV MINC_LIB_DIR=/opt/freesurfer/mni/lib0 B
35ENV MNI_DATAPATH=/opt/freesurfer/mni/data0 B
36ENV FMRI_ANALYSIS_DIR=/opt/freesurfer/fsfast0 B
37ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
38ENV MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
39ENV PATH=/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/lib/afni/bin:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
40/bin/sh -c echo "cHJpbnRmICJrcnp5c3p0b2YuZ29yZ29sZXdza2lAZ21haWwuY29tXG41MTcyXG4gKkN2dW12RVYzelRmZ1xuRlM1Si8yYzFhZ2c0RVxuIiA+IC9vcHQvZnJlZXN1cmZlci9saWNlbnNlLnR4dAo=" |244 B
41/bin/sh -c mkdir -p /opt/ants417.43 MB
42ENV ANTSPATH=/opt/ants0 B
43ENV PATH=/opt/ants:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/lib/afni/bin:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
44/bin/sh -c mkdir -p /opt/c3d44.81 MB
45ENV C3DPATH=/opt/c3d/0 B
46ENV PATH=/opt/c3d//bin:/opt/ants:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/lib/afni/bin:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
47/bin/sh -c curl -sSLO https://repo.continuum.io/miniconda/Miniconda3-4.2.12-Linux-x86_64.sh38.23 MB
48ENV PATH=/usr/local/miniconda/bin:/opt/c3d//bin:/opt/ants:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/lib/afni/bin:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LANG=C.UTF-8 LC_ALL=C.UTF-80 B
49/bin/sh -c conda config --add159 B
50ENV ACCEPT_INTEL_PYTHON_EULA=yes0 B
51/bin/sh -c conda install -y280.4 MB
52/bin/sh -c python -c "from1017.79 KB
53ENV MKL_NUM_THREADS=10 B
54ENV OMP_NUM_THREADS=10 B
55ADD file ... in requirements.txt 194 B
56/bin/sh -c pip install -r294.18 MB
57COPY dir:d0e268ae283b855d3cce916fa6ce65d517df26b2aa761c50c3c3bc0cc98b0d3b in /root/src/fmriprep 12.28 MB
58/bin/sh -c cd /root/src/fmriprep &&15.78 MB
59/bin/sh -c mkdir /niworkflows_data104 B
60ENV CRN_SHARED_DATA=/niworkflows_data0 B
61/bin/sh -c python -c 'from68.93 MB
62WORKDIR /root/src/fmriprep0 B
63ENTRYPOINT ["/usr/local/miniconda/bin/fmriprep"]0 B
64ARG BUILD_DATE0 B
65ARG VCS_REF0 B
66ARG VERSION0 B
67LABEL org.label-schema.build-date= org.label-schema.name=FMRIPREP org.label-schema.description=FMRIPREP0 B

Command

ADD file:7529d28035b43a2281b9ba1d3cf6bde4f0d9517693e9412328761d51c24091b4 in /